Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDILSIFPDMFSGVTGNSIIKKAIENERVAVEVTDFREYAEGKHHIVDDYPYGGGAGMLLKAQPIFDAVQAVKEKQPETKPRVILMDPAGKRFNQKMAEEFAEEEHLVFICGHYEGYDERIREHLVTDEVSIGDYILTGGEIGAMIVMDSVIRLLPGVLGNKDSAVTDSFSTGLLEHPHYTRPADFRGMKVPDILLSGNHAWIEEWRDKESLKRTYERRPDLLKNYPLTDKQKTWLKEWSDSK
1P9P Chain:A ((7-246))
MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGA-KVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLG-----------EGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEF----
General information:
TITO was launched using:
RESULT:
Template:
1P9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149135 for 1657 contacts (-90.0/contact) +
2D Compatibility (PS) -24876 + (NN) -9252 + (LL) 60
1D Compatibility (HY) -23200 + (ID) 5350
Total energy: -211753.0 ( -127.79 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_1P9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9P-query.scw
PDB file :
Tito_Scwrl_1P9P.pdb
: