Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEKQVAEQLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKQTFGEIDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGKQLLEESGTKLVTLTNYDELIEVALNENYVTGEDMETLKEWKKNP--EKWGK
3M3H Chain:A ((24-231))
-AMKKEIASHLLEIGAVFLQPNDPFTWSSGMKSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGT---GIAHAAWVSDRMDLPMCYVR---------NQIEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDYSALTEVAAEKGIIGQAETKKLQEWRKNPADEAW--
General information:
TITO was launched using:
RESULT:
Template:
3M3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144251 for 1611 contacts (-89.5/contact) +
2D Compatibility (PS) -21644 + (NN) -9925 + (LL) 552
1D Compatibility (HY) -21600 + (ID) 5850
Total energy: -202718.0 ( -125.83 by residue)
QMean score : 0.725
(partial model without unconserved sides chains):
PDB file :
Tito_3M3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M3H-query.scw
PDB file :
Tito_Scwrl_3M3H.pdb
: