Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL
2GU3 Chain:A ((25-134))
--------------------------------------------------------------------------------DLAHVDQVETFVG-KEKYYVVKGTDKKGTALYVWVPADKKAKILSKEAKEGISEDKAAKIIKDEGLVSKQKEVHLAREGNVLLWEVTYLDKEGQYSLSYVDFTTGKILKNI---
General information:
TITO was launched using:
RESULT:
Template:
2GU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23139 for 778 contacts (-29.7/contact) +
2D Compatibility (PS) -11998 + (NN) -4050 + (LL) 7180
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -42407.0 ( -54.51 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_2GU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GU3-query.scw
PDB file :
Tito_Scwrl_2GU3.pdb
: