Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEMVEFSSLDVPVFGNLSEMLEEIKPDCVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRTIAESK-KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTGVKTAEMMAETREFVKQGAADEVELIEGARGAEYEGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENILD
1C3V Chain:A ((1-243))
MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA---------------------GDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLD
General information:
TITO was launched using:
RESULT:
Template:
1C3V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116495 for 1949 contacts (-59.8/contact) +
2D Compatibility (PS) -25549 + (NN) -5755 + (LL) 1400
1D Compatibility (HY) -20000 + (ID) 5850
Total energy: -172249.0 ( -88.38 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_1C3V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C3V-query.scw
PDB file :
Tito_Scwrl_1C3V.pdb
: