Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGSRRLFLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRIPLIFAYLVMLFGRISFDIASPTTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVNNFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPNMRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKNRTFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYN-PASGK-VTVSIGVAS--ASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE |
| 3BRE Chain:A ((162-336)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETNLVLQRLMNS---DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99272 for 1321 contacts (-75.1/contact) +
2D Compatibility (PS) -18895 + (NN) -10203 + (LL) 19296
1D Compatibility (HY) -12000 + (ID) 3450
Total energy: -124524.0 ( -94.26 by residue)
QMean score : 0.479
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