Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFYMVDQGVLVWGSVVLILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEKYLPEIGYATFWLTVLVLWFVYDKTIKNKHLTLEFPHDE |
| 3MWC Chain:A ((346-390)) | ------------------------YGKGNDLVENTMTDGK--IYVPDEPGASFDMTLSHLEALGKKIWESQ------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16354 for 169 contacts (-96.8/contact) +
2D Compatibility (PS) -4701 + (NN) -1748 + (LL) 14172
1D Compatibility (HY) -400 + (ID) 850
Total energy: -9881.0 ( -58.47 by residue)
QMean score : -0.079
|
|
|