Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGTIVIVGLGLIGGSIALAIKAKHPEAHIIGIDVSYHSLEVGKSLGVIDEIGESILIDGPKADLLIFCCPVKETEQLLMRLPGLRLKENVIVTDTGSTKGTIMEASTA-LRESGITFIGGHPMAGSHKSGVRAAKELLFENAYYLLTPTKDVTEDNVTDLKTWLSGTNAKFLVLSPNEHDEITGMLSHLPHIVAAALVNQTQSFTEEHPAAFRLAAGGFRDITRVASSDPRMWTDISISNKKTLTKQLTIWRDSMNQALEMLESEDATSIYAFFDGAKEFRDSLPVHQGGAIPSFYDLFVDVPDYPGVISEVTRYLGEEEISLTNIKILETREDIFGVLQITFQSDEDRDRAKRCIETRSNYTCHYE |
3DZB Chain:A ((4-298)) | --KTIYIAGLGLIGGSLALGIKRDHPDYEILGYNRSDYSRNIALERGIVDRATGDFKEFAPLADVIILAVPIKQTMAYLKELADLDLKDNVIITDAGSTKREIVEAAERYLTGKNVQFVGSHPMAGS------AADVTLFENAYYIFTPTSLTKETTIPELKDILSGLKSRYVEIDAAEHDRVTSQISHFPHLLASGLMEQAADYAQAHEMTNHFAAGGFRDMTRIAESEPGMWASILMTNGPAVLDRIEDFKKRLDHVADLIKAEDESAIWEFFDNGRKKRKEMEIHKKGGVESAF----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44199 for 2142 contacts (-20.6/contact) +
2D Compatibility (PS) -29195 + (NN) -4053 + (LL) 5148
1D Compatibility (HY) 8800 + (ID) 2100
Total energy: -65599.0 ( -30.63 by residue)
QMean score : 0.208
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