Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPKVAALQANSNVETEIYPDGWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLLDTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAIDEKTTIVWICNPNNPTGNYIDLADIQAFLDKVPSDILVVLDEAYIEYVTPQPKKHEKLIRTYKNLIITRTFSKIYGLASARVGYGIADKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQVKLYPANGNFVLIDLGIEARTIFSYLEKNGYITRSGAALGFPTAVRITIGKEEENSAVIALLEKLL |
| 3FFH Chain:A ((5-363)) | -KWKKSLAGLSS----KREEEVMAELGLTKITKLSSNENPLGTSKKVAAIQANSSVETEIY----ASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIALLEKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192151 for 2920 contacts (-65.8/contact) +
2D Compatibility (PS) -38908 + (NN) -23758 + (LL) -180
1D Compatibility (HY) -48800 + (ID) 16550
Total energy: -320347.0 ( -109.71 by residue)
QMean score : 0.585
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