Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVFAGLKKDPSVHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALIKHN
4UQF Chain:A ((16-201))
--QIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVFAGLKKDPSVHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALIKH-
General information:
TITO was launched using:
RESULT:
Template:
4UQF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109552 for 1392 contacts (-78.7/contact) +
2D Compatibility (PS) -20359 + (NN) -8615 + (LL) 232
1D Compatibility (HY) -27200 + (ID) 9300
Total energy: -174794.0 ( -125.57 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_4UQF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UQF-query.scw
PDB file :
Tito_Scwrl_4UQF.pdb
: