Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ |
| 4UZ2 Chain:A ((52-96)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THVVAPGDTLFSLARR-YGTT-----VEALMRLNGLSSPEIKVGQVLRLPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12936 for 270 contacts (-47.9/contact) +
2D Compatibility (PS) -5255 + (NN) -4209 + (LL) 15036
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -13664.0 ( -50.61 by residue)
QMean score : 0.579
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