Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFGGAGIDVAQDPIPSSTLKACQDADAILLGAIGGPKWDNAPK--RPEDGLLALRKALGLFANIRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKHW--DESAAVDSLTYTRAEIERIIEKAFEIAATRNKKVTSVDKANVLASSKLWRKIAEEVASRHPDITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAGFLTADL----GGNTTTTDFTNEVLKQIEGGE |
| 3U1H Chain:A ((4-351)) | ---KIAVLPGDGIGPEVMEAAIEVLKAVAERFGHEFEFEYGLIGGAAIDEAGTPLPEETLDVCRGSDAILLGAVGGPKWDQNPSELRPEKGLLGIRKGLDLFANLRPVKVYDSLADASPLKKEVIEGVDLVIVRELTGGLYF------EEGEEAAVDTLLYTREEIERIIRKAFELALTRKKKVTSVDKANVLESSRLWREVAEEVAKEYPDVELEHMLVDNAAMQLIRNPRQFDVIVTENMFGDILSDEASMITGSLGMLPSASLSTDGLGLYEPVHGSAPDIAGKGIANPLATILSAAMMLRYSFGLEEEAKAIEKAVEKVLAEGYRTADIAKPGGKYVSTTEMTDEV-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3U1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180109 for 2895 contacts (-62.2/contact) +
2D Compatibility (PS) -36790 + (NN) -19618 + (LL) 820
1D Compatibility (HY) -36400 + (ID) 10350
Total energy: -282447.0 ( -97.56 by residue)
QMean score : 0.575
|
|
|