Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSILMNQAIQAFLLEDIGQYDLSAGTVFPRDTMGEGVFLAKETGILCGISIPPKVYELLGGNIQFEAYKKDGDWVQKGDIIAAVKAPVRTLLSGERVILNLMQRMSGIASQTNFAIKQLDDSAIRICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSKGGIKA
1X1O Chain:A ((14-281))
-----LEEALRAWLREDLGQGDLTSLLVVPEDLEGEAVILAKEGGVLAGLWVAERVFALADPRTAFTPLVAEGARVAEGTEVARVRGPLRGILAGERLALNLLQRLSGIATLTRAYVEALAGTKAQILDTRKTTPGLRALEKYAVRVGGGRNHRYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEVRSLEELEEALEAGADLILLDNFPLEALREAVRRVGGRVPLEASGNMTLERAKAAAEAGVDYVSVGALTHSAKALDLSL--------
General information:
TITO was launched using:
RESULT:
Template:
1X1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162039 for 2228 contacts (-72.7/contact) +
2D Compatibility (PS) -29719 + (NN) -12631 + (LL) 504
1D Compatibility (HY) -20000 + (ID) 5800
Total energy: -229685.0 ( -103.09 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_1X1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X1O-query.scw
PDB file :
Tito_Scwrl_1X1O.pdb
: