Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSLYMLVSTFAVAFIITVIGVPLFIPFLVKLKFGQSIRDEGPKMHEKKSGTPTMGAVVFITAMLISFLVFSFISGEVSAATWLLFIALALFGALGFLDDYIKVVQKRNLGLTSKQKFLGQVVISILFYLVYHFNDFAETLNIPFTNIEVDLGWFFVIFILFWLVGFSNAVNLTDGLDGLVSGLSVIAFSAFGVIAFYQEQMDVAIFCFAIVGGMLGFLLFNKNPAKIFMGDTGSLALGGSIAAISILVHQEWLLLLIGIIFVIETASVILQVFYFKATGGKRIFRMTPIHHHFELGGWSEWRVVLTFWGIGLVGAIISVCVVIF |
| 3LPC Chain:A ((121-171)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVAGVAYGAKVVPVRALGRCGGYDS--DISDGLYWAAGGRIAGIPENRNPAKV------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26923 for 235 contacts (-114.6/contact) +
2D Compatibility (PS) -5434 + (NN) -789 + (LL) 24712
1D Compatibility (HY) -800 + (ID) 750
Total energy: -9984.0 ( -42.49 by residue)
QMean score : -0.021
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