Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKHETVLLHETVDMLEVKPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAKIKLADYSDKVTFIKANFRDMKEALNERG-IEAVDGILYDLGVSSPQLDERERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERRREVKPIETTGELVDIIKTAIPAPARRKGGHPGKRTFQAIRIAVNDELGAVEDSLEKALTLIKPGGRISVITFHSLEDRITKQLFQEATKGPDLPPGLPVIPDEYKPDFKLATRK-----PIVPSEEELEQNNRARSAKLRVIEKIIK |
3TKA Chain:A ((42-344)) | ----TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT-IDD--PRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVK------HPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRG----------------------RQLRALGKLMPGEEEVAENPRARSSVLRIAER--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83423 for 2312 contacts (-36.1/contact) +
2D Compatibility (PS) -29793 + (NN) -10872 + (LL) 1448
1D Compatibility (HY) -25200 + (ID) 6400
Total energy: -154240.0 ( -66.71 by residue)
QMean score : 0.553
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