Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
1O6B Chain:A ((4-159))
----IAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEERCELLREVTKDIPNITVETSQGLLIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYDGSVSEFVPPEVELALQQKFR
General information:
TITO was launched using:
RESULT:
Template:
1O6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109096 for 1210 contacts (-90.2/contact) +
2D Compatibility (PS) -17238 + (NN) -9686 + (LL) 24
1D Compatibility (HY) -20800 + (ID) 4950
Total energy: -161746.0 ( -133.67 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1O6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O6B-query.scw
PDB file :
Tito_Scwrl_1O6B.pdb
: