Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLKVWSVLTIICMTVVVFGGALVTKTGSADGCGNSWPLCNGQLVRLTDVTPEKLIEFMHRMTTGISSIFVIVLAICAWIYMKNRRETKPLAIIAVLFLIIQALMGMAAVVWGQNPYIMA------LHFGISIICYASIVLLALMIFEVDRKFDARNLVMGTKLRVNIYALTIYTYLAVYTGALVRHEKASMAVPVWPFENGHFIMPTSVQDYVQYFHRLAAFILIVWLLYVTWLVFRDYRRYRVLTFSMVLSLVFIALQAVTGALSVYTGVNLYIALAHSLIITMLFALLCYLCLLASRSKSNRLRIK |
| 1YEW Chain:C ((163-259)) | ---------------------------------------------IVRDTDFTPSHIIEFY------LSYPIYIITGFAAFIYAKTRLPFFA-----------------------HTFWFMEELFVAPLHYGFVIFGWLALAVM----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16981 for 278 contacts (-61.1/contact) +
2D Compatibility (PS) -6120 + (NN) 2718 + (LL) 23868
1D Compatibility (HY) -8400 + (ID) 1050
Total energy: -5965.0 ( -21.46 by residue)
QMean score : -0.169
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