Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIPFIIQYVKSTLGPTAIFEGRKVLKFWQMVIVFIFLNALLLLPVSAHFANQSSFDLPSLMPKMATLGTDQLASKISGLTLENGALTDKNAHIVEKTVNGVAGVNLTKAELSGAKNVINFKDQEMTLTDASGYNFEVSYPKDATLSEITSGESLVDWVSAQWYLENQAFVFLSMVLMIGSII---FVSSLMLTVFTTLFIW--MTKRSSFSSIASFKESVNLTLNALGIPVIAACIIGFIYFDITIIMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAASR |
1QGU Chain:A ((374-466)) | -----------------------------------------------------------------------------------------------------------------------------------AAGYEFAHNDDYDRTLPDLKEGTLLFDDASS---YELEAFVKALKPDLIGSGIKEKYIFQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMTLN------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QGU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27546 for 488 contacts (-56.4/contact) +
2D Compatibility (PS) -8938 + (NN) 2527 + (LL) 16180
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -22327.0 ( -45.75 by residue)
QMean score : 0.076
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