Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIIGIAACTSGIAHTYIAKEKLTKAGLALGHNVHIETQGTIGIEDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEINN
2M1Z Chain:A ((5-97))
--IIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVIN--------
General information:
TITO was launched using:
RESULT:
Template:
2M1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51693 for 737 contacts (-70.1/contact) +
2D Compatibility (PS) -10209 + (NN) -4878 + (LL) 532
1D Compatibility (HY) -8800 + (ID) 2050
Total energy: -77098.0 ( -104.61 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_2M1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M1Z-query.scw
PDB file :
Tito_Scwrl_2M1Z.pdb
: