Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAGLLGFALMVFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAAIMAAVVMMLIGIITAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINMTVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVR----QFDEKINHVMDAGSRQVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSEAFRNGGEEFSIVLLDCPIEKGNFFAEQVRRETEEYDFMIPSG-QVVKITISVGVSSSKDGANTSEGLFKSADEALYKAKLTGRNQVCIADGN |
| 1W25 Chain:A ((291-448)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQLTGLHNRRYMTGQLDSLVKRAT-LGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67737 for 1156 contacts (-58.6/contact) +
2D Compatibility (PS) -17349 + (NN) -12607 + (LL) 19496
1D Compatibility (HY) -10800 + (ID) 3100
Total energy: -92097.0 ( -79.67 by residue)
QMean score : 0.492
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