Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVLEESDQMWVPVHKSWRLNERHYGALQGLNKQETAEKYGADQVQKWRRSYDTLPPLLEENDERQAKNDRRYQLLDTHAIPSGENLKVTLERVIPYWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGISDDEIMDLEIPTGVPLVYELNADLKPVNKYYLDK
1E59 Chain:A ((4-229))
-KLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYL--
General information:
TITO was launched using:
RESULT:
Template:
1E59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72505 for 1824 contacts (-39.8/contact) +
2D Compatibility (PS) -24233 + (NN) -6529 + (LL) 196
1D Compatibility (HY) -23600 + (ID) 7000
Total energy: -133671.0 ( -73.28 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1E59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E59-query.scw
PDB file :
Tito_Scwrl_1E59.pdb
: