Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKLIYFLSQTH-IRSAIAEAWAKRLSLSNVKFISGSWHKSKSTPFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYWDIDDPEQEIAL-PQKWASYQEVCDNIALSVKNLEHVLIEA
2IPA Chain:B ((1-132))
MENKIIYFLSTGNSARSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLSGDAADKCPMTPPHVKRE--HWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLK---------
General information:
TITO was launched using:
RESULT:
Template:
2IPA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25081 for 1045 contacts (-24.0/contact) +
2D Compatibility (PS) -13577 + (NN) -5460 + (LL) 1472
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -51596.0 ( -49.37 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_2IPA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IPA-query.scw
PDB file :
Tito_Scwrl_2IPA.pdb
: