Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
3U59 Chain:A ((68-97))
-QEKLEQAEKKATDAEAEVASLNRRIQLVEE--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3U59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3419 for 111 contacts (30.8/contact) +
2D Compatibility (PS) -3470 + (NN) -3705 + (LL) 3268
1D Compatibility (HY) -400 + (ID) 700
Total energy: -1588.0 ( -14.31 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_3U59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U59-query.scw
PDB file :
Tito_Scwrl_3U59.pdb
: