Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIWLKKIREENGLTQQDVAELADVERTTYASIEQGRRNPSVVNAMRIASVLDFEWTIFFDDKVREKSHFYLNEKQEARK
2B5A Chain:A ((15-70))
----LKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFF--------------------
General information:
TITO was launched using:
RESULT:
Template:
2B5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21021 for 374 contacts (-56.2/contact) +
2D Compatibility (PS) -6023 + (NN) -1268 + (LL) 2076
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -31786.0 ( -84.99 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2B5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5A-query.scw
PDB file :
Tito_Scwrl_2B5A.pdb
: