Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVTHSKNGYYDGLIFHRVIPEFMIQGGDPDGRGTGGESIWGESFEDEF-STEAFNLRGALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQ-DKPVNDVVIEKINIK
2A2N Chain:A ((28-176))
--------------------TSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVP---------------------------TPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK
General information:
TITO was launched using:
RESULT:
Template:
2A2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48603 for 1122 contacts (-43.3/contact) +
2D Compatibility (PS) -15676 + (NN) -7318 + (LL) 3496
1D Compatibility (HY) -11200 + (ID) 4500
Total energy: -83801.0 ( -74.69 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_2A2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A2N-query.scw
PDB file :
Tito_Scwrl_2A2N.pdb
: