Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIQIALSIGLLLYSISTFLYLYRILKGPTTSDKVVALDSIGMNLVAIVALLSMFYDTHAFLDVILLIALLAFIGTVSFAKFIEKGKVIDRERDN
2K21 Chain:A ((40-76))
--------------------------------------------------------GKLEALYVLMVLGFFGFFTLGIMLSYIRSKKLEHSND--
General information:
TITO was launched using:
RESULT:
Template:
2K21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8270 for 140 contacts (-59.1/contact) +
2D Compatibility (PS) -3816 + (NN) -2987 + (LL) 5460
1D Compatibility (HY) -4400 + (ID) 250
Total energy: -14263.0 ( -101.88 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_2K21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K21-query.scw
PDB file :
Tito_Scwrl_2K21.pdb
: