Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVVTNIVKIIREKKGITQNELAHSLDVSRQTIHAIEKGKYNPSLELSLKIAKFFDLPVEEIFNLEGE
2XJ3 Chain:A ((1-66))
-MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIFQWQPE
General information:
TITO was launched using:
RESULT:
Template:
2XJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29661 for 428 contacts (-69.3/contact) +
2D Compatibility (PS) -7176 + (NN) -4113 + (LL) 192
1D Compatibility (HY) -8800 + (ID) 1900
Total energy: -51458.0 ( -120.23 by residue)
QMean score : 0.822
(partial model without unconserved sides chains):
PDB file :
Tito_2XJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XJ3-query.scw
PDB file :
Tito_Scwrl_2XJ3.pdb
: