Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSRKLDQLYRQVIMDHYKNPRNNGELPDSDVTIDLNNPTCGDQIHLHLKMDGDKIVAAKFTGSGCSISMASASMMTQSIIGKTEKEALKMSREFSEMVQGHDHETIDEYGDVEALAGVAKFPARIKCATLSWKAMERAIFEKEGTK
1SU0 Chain:B ((6-139))
-----LNHLYMAVVADHSKRPHHHGQL-DGVEAVQLNNPTCGDVISLTVKFDEDKIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQRIKCSTLAWNALKEAI-------
General information:
TITO was launched using:
RESULT:
Template:
1SU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62321 for 1081 contacts (-57.7/contact) +
2D Compatibility (PS) -14100 + (NN) -6061 + (LL) 604
1D Compatibility (HY) -11600 + (ID) 3600
Total energy: -97078.0 ( -89.80 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1SU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SU0-query.scw
PDB file :
Tito_Scwrl_1SU0.pdb
: