Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VIFIEVMKERFGEFE--GETVWKWTMINDHDMRMSVLNYGAIVTSLETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNEGSNHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNKNEWLVDYEARSNQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIGEKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHENGRP-DAVLFDPKSGRRLEMETKADSVLIYTANSLDGSFEIDERAV-PKYAGITMETQGLVDAINHEGFGDIVLRPEKPFTSRTAFRFTVES |
1SNZ Chain:A ((4-341)) | -----VTRAVFGELPSGGGTVEKFQLQSDL-LRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNGVQ----FSRISPDGEEGYPGELKVWVTYTLDG-GELIVNYRAQASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGK--HLQDFHLN----GFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKFSV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96578 for 2931 contacts (-33.0/contact) +
2D Compatibility (PS) -35614 + (NN) -6887 + (LL) 2152
1D Compatibility (HY) -23600 + (ID) 6650
Total energy: -167177.0 ( -57.04 by residue)
QMean score : 0.433
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