Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNGVQPLDPVAIQIGSISVKWYGVIIASAVVIALLLALSEANKRKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKIWHGGIAIYGALIGAVLTAIIFSRIKKISFWQLADVVAPSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLHLPDFIINQMYIDGAYYQPTFLYESLWNVLGFVILLIIRRTKIRRGELFLGYVIWYSFGRFFIEGMRTDSLMWGDFRVSQALSLLLIVLSIGIIIYRRLKMNPPYYMEDKFGKVVKKK |
| 3KOW Chain:A ((598-669)) | --------------------------------------------------------IEKTPLKIVAATVG-----EDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISH------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43333 for 486 contacts (-89.2/contact) +
2D Compatibility (PS) -6967 + (NN) 6312 + (LL) 17540
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -29048.0 ( -59.77 by residue)
QMean score : 0.101
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