Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPL--LGKVENALELKAYQIDKKEFTEKVVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT
2CVE Chain:A ((3-188))
-----LTLADKVVYEEEIQKSRFIAKAAPVASEEEALAFLAENREP--EATHNGHAYKIGLLYRFS---DDGEPSGTAGRPILHAIEAQGLDRVAVLVVRYFGGVKLGAGGLVRAYGGVAAEALRR--APKVPLVERVGLAFLVPFAEVGRVYALLEARALKAEETYTPEGVRFALLLPKPEREGFLRALLDATRGQV---------------
General information:
TITO was launched using:
RESULT:
Template:
2CVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108262 for 1428 contacts (-75.8/contact) +
2D Compatibility (PS) -20167 + (NN) -5127 + (LL) 1636
1D Compatibility (HY) -10000 + (ID) 3650
Total energy: -145570.0 ( -101.94 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_2CVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CVE-query.scw
PDB file :
Tito_Scwrl_2CVE.pdb
: