Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLIWSILISFAVGIIMVPIIRKFAFRINAVDTPRERHKHTKTTATLGGLAIFISFSVGMILAPIDKSGFLPIYFGALIIIATGFIDDIFDLSPKWKMLGQILAALCVTVWGDITINFINVPFYGQVDFGYFAIPLSIIWIVAIVNALNLIDGLDGLAGGISIIALMTIAGMALLLKDVFVAPVALILVAAVAAFLIYNFPPASIFMGDTGALFLGYMIAVLSLMGFKNVTFISLLVPLIILGVPLSDTFFAIVRRLKERMPISSADRSHIHHRLMALGFTEKQTVLLI---YCMALLFSMTGFVFSFSTTWGAMLLLLLLIFSIEIIVEFIGLIGEDYRPILNLLQKIHRKRK |
| 3RIV Chain:A ((128-172)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGY-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8778 for 184 contacts (-47.7/contact) +
2D Compatibility (PS) -4489 + (NN) -1809 + (LL) 27896
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 9320.0 ( 50.65 by residue)
QMean score : 0.223
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