Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKDVGIDLGTANVLIHVKGRGIVVNEPAVVAINNKTGQ--VLAVGTEARDMVGRTPGDITAIKPMKDGVIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCPTNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIFEPSGNMIIDIGGGTADVAVLSMGDIVTSQSVKVAGNKWDADILNYVKRKYNLLIGERTAENIKVTIGTACQGAKEE--KMEIRGRDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDRGIIMTGGGSLLHGLDELMSEQLKVPVLITENPLDVVALGTGILLDSLTNKKRNRF |
4CZE Chain:A ((3-326)) | -SNDIAIDLGTANTLIYQKGKGIVLNEPSVVALRNVGGRKVVHAVGIEAKQMLGRTPGHMEAIRPMRDGVIADFEVAEEMIKYFIRKVHNRKGFVNPKVIVCVPSGATAVERRAINDSCLNAGARRVGLIDEPMAAAIGAGLPIHEPTGSMVVDIGGGTTEVAVLSLSGIVYSRSVRVGGDKMDEAIISYMRRHHNLLIGETTAERIKKEIGTARAP---EGLSIDVKGRDLMQGVPREVRISEKQAADALAEPVGQIVEAVKVALEATPPELASDIADKGIMLTGGGALLRGLDAEIRDHTGLPVTVADDPLSCVALGCGKVLE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188237 for 2842 contacts (-66.2/contact) +
2D Compatibility (PS) -34838 + (NN) -17939 + (LL) 1020
1D Compatibility (HY) -28000 + (ID) 7850
Total energy: -275844.0 ( -97.06 by residue)
QMean score : 0.584
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