Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFVTIQFLEGRTDDQKKALVSEVTEVVSKNLKAPKENIHVILEEMKKTDYGVGGVRKSDI
2X4K Chain:A ((3-62))
MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSD-
General information:
TITO was launched using:
RESULT:
Template:
2X4K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11286 for 327 contacts (-34.5/contact) +
2D Compatibility (PS) -6613 + (NN) -3677 + (LL) 204
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -29522.0 ( -90.28 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_2X4K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X4K-query.scw
PDB file :
Tito_Scwrl_2X4K.pdb
: