Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVGIFPSMIILFTVGISAVLYPLLPSEVAVHFGTDFSPDMFMQKWLGLILIPFLMIMFTGTEYYGKEKVNQESLLEFEYCFRLLLVLLTIIQMSIIVYALGYDIPTGRFSLVTAGAFMFVVAAYIQYSKKLFKFLTMIGFKKIDAWSRNLLRKITTVTLNIAGTICFILALFMRNDPSYLMLAMLMTMCVIVVGSGVYLNKK |
| 2J5D Chain:A ((176-186)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIGLGIYIGRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102 for 35 contacts (-2.9/contact) +
2D Compatibility (PS) -962 + (NN) 1002 + (LL) 18588
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 17176.0 ( 490.74 by residue)
QMean score : -0.183
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