Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAVGLTKAS--TD---FVDIEIDKPVPENHDLLVKIKAISINPVDTKQREAAKLSGEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGDVTRPGVYAEYTLIDERLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKG--KSILIINGAGGVGSIATQLA-ANTGLEVIATASRSETVEWTKSHGANYVINHRENIPEQLEELGFKKGVDFILCLHNTSAHWDEMQEAIRPQGKICSIVELTEPVEMTLLKDKSATFSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE |
4DVJ Chain:A ((24-359)) | -KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPP--TDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPA-FVFSTTHTDKHAAEIADLIAPQGRFC-LIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGF- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -133869 for 2928 contacts (-45.7/contact) +
2D Compatibility (PS) -34440 + (NN) -2557 + (LL) 96
1D Compatibility (HY) -18800 + (ID) 6200
Total energy: -195770.0 ( -66.86 by residue)
QMean score : 0.497
|
|
|