Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLMMKNITKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKDLTKVRLDKVGFIFQGANLIPYLNVRDQL---LVIAELSGDKGRVAKEKADELLKELGLTAR-ENNYPESLSGGEKQRVAIARALMNDPDIILADEPTASLDASRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDGYLKD
1F3O Chain:A ((2-221))
--IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDG----
General information:
TITO was launched using:
RESULT:
Template:
1F3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107629 for 1716 contacts (-62.7/contact) +
2D Compatibility (PS) -23703 + (NN) -9411 + (LL) 516
1D Compatibility (HY) -17200 + (ID) 5100
Total energy: -162527.0 ( -94.71 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_1F3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F3O-query.scw
PDB file :
Tito_Scwrl_1F3O.pdb
: