Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPINTLIIFGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFIATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFLAVYVNAYDAGIANLLWQGEMVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDEDIRNHRYTLPYYIGRKMGVLLFNTLYYASFLAVVVSVAINFLHPIMLLSLITIYPVYRNLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT |
3S8E Chain:A ((239-289)) | --------------------------------------------YGSSLEFTELLTLVNRKVDQRRV------D-----SAIGKKQVPCFASMLTKKLHFF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13310 for 216 contacts (-61.6/contact) +
2D Compatibility (PS) -4718 + (NN) 1033 + (LL) 24460
1D Compatibility (HY) -1200 + (ID) 850
Total energy: 5415.0 ( 25.07 by residue)
QMean score : 0.210
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