Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMVESYHENGAYFVIAPQIAIPHARPTDGVENSAVSLVVLKDGVNFGHAANDPVRLVFGLAATSSEAHLKVIQKIVSLLSNNDNIEKMIHSEDYQAIGELVEG
3OXP Chain:A ((7-143))
-TLLTSDVIQVVSQAKDWRDAIAISCQPLIDNGAVEARYVEAIYRSHEAIGPYYVVGPGIAMPHARPEDGVNRLSLALTVITEGVTFNAEGNDPVKLLIVLAATDSNSHIEAISQLAQLFDTASDVQALLNAKTPQDI------
General information:
TITO was launched using:
RESULT:
Template:
3OXP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105168 for 1053 contacts (-99.9/contact) +
2D Compatibility (PS) -15016 + (NN) -9896 + (LL) 440
1D Compatibility (HY) -12800 + (ID) 2300
Total energy: -144740.0 ( -137.45 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3OXP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OXP-query.scw
PDB file :
Tito_Scwrl_3OXP.pdb
: