Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKAVVKTNPGYDQMELKDVEEPQVYGDKVKIKVAFTGICGSDIHTFKGEYKNPTTPVTLGHEFSGVVVEVGPDVTSIKVGDRVTSETTFETCGECIYCKEHDYNLCSNRRGIGTQANGSFAEFVLSREESCHVLDERISLEAAALTEPLACCVHSALEKTTIRPDDTVLVFGPGPIGLLLAQVVKAQGATVIMAGITKDSDRLRLAKELGMDRIVDTLKEDLAEVVLGMTG--GYGAERVFDCSGAVPAVNQGLPLTKKKGDFVQVGLFAE-KKNAIDEESIIQREIAYIGSRSQKPSSWILALDLLANGKIDTDKMITKVYGLDDWREAFEAVMAGNEIKVLVKS |
| 4EJ6 Chain:A ((34-360)) | ------------NISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPS-TPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNI-SCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLH-GVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILS-TRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGS-FINPFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165578 for 2838 contacts (-58.3/contact) +
2D Compatibility (PS) -34511 + (NN) -9768 + (LL) 784
1D Compatibility (HY) -19600 + (ID) 5900
Total energy: -234573.0 ( -82.65 by residue)
QMean score : 0.473
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