Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDINMFILYFFIYSVLGWAWEEVFCSISEKKLVYRGFLYGPYCPIYGFGVTAVLMMILPFQNNLWALFIFSMIICTVIEYVTATILEALFHTTWWDYHNWPLNVKGRICLPISIFWGFACIIVVRFLHPLVTEFADWILSWGGWIIPALIVVLMLIDTIKSVTSMLSFQKALAEFNEKLNAQANELKASVKERAKEFEEGLLKKQENVDMKIAEI-----EAKRKQDKELAASMRKLKFNERRMLKSFPKMKVKRAAPFKNLNKSLLRVDKLKRK |
1CII Chain:A ((380-455)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------LLDARNKITSAES---AVNSARNNLSARTNEQK-----HANDALNALLKEKENIRNQLSGINQKIAEEKRKQD-ELKATKDAINF------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8253 for 273 contacts (30.2/contact) +
2D Compatibility (PS) -8183 + (NN) -8768 + (LL) 18416
1D Compatibility (HY) -2000 + (ID) 1400
Total energy: 6318.0 ( 23.14 by residue)
QMean score : 0.432
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