Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRHVVIFCASILNRFFASVECVKRRLNPL--EAYLVVMSNAERAGGLVLAATP--KMKQEHHIKTGSRMYELPTWDKRIIIAPPRMKLYLKVNAMIQAIFRRYVPAEFIHVYSIDECFLDVTGSHLLFGSTEEIVRKIQRDILEELRLYVTVGIGDNPLLAKLALDNVAKNRDDGIAEWRYEHVPETIWKIRHLDDVCGIGRRTAVRLQKMGIFNMYQLSQTPPQVLKNVMGVVGEQLYYHAHGIDYSLLNEKYVPVSKSYGKSQILEKDYHVPAEVEIVIREMVEEVAMRLRQNHVDTAVIHLSVGYSKYSIKKGFSHQAKIPPTSSSHALIPYFLQLFRRYDEREPVRSIAISCGKITLKTGLQLNLFEDFTQTLNHEQLEITVDKIRSRYGFKSLMHASSLLNGATGLKRSEMVGGHKG |
| 4R8U Chain:B ((8-279)) | -----------MDCFFAAVEM---RDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCP----HLTLLPGRFDAYKEASNHIREIFSRYT--SRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASD---MNKPNGQFVITPAEVPAFLQTL-PLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSER--LRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPD---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165606 for 1871 contacts (-88.5/contact) +
2D Compatibility (PS) -28692 + (NN) -9208 + (LL) 10348
1D Compatibility (HY) -10400 + (ID) 3950
Total energy: -207508.0 ( -110.91 by residue)
QMean score : 0.444
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