Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKPYGVVIISHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRIGTSFDAVNEAIENNEANKVYTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK
3CT6 Chain:A ((3-122))
----YGIVIVSHSPEIASGLKKLIREVAKNISLTAIGGLENGEIGTSFDRVMNAIEENEADNLLTFFDLGSARMNLDLVSEMTDKELTIFNVPLIEGAYTASALLEAGATFEAIKEQLEKMLIE
General information:
TITO was launched using:
RESULT:
Template:
3CT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70112 for 948 contacts (-74.0/contact) +
2D Compatibility (PS) -12996 + (NN) -4551 + (LL) 276
1D Compatibility (HY) -13200 + (ID) 2800
Total energy: -103383.0 ( -109.05 by residue)
QMean score : 0.750
(partial model without unconserved sides chains):
PDB file :
Tito_3CT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CT6-query.scw
PDB file :
Tito_Scwrl_3CT6.pdb
: