Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHK--QKVLMRKS---FEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
4Q6M Chain:A ((285-345))
LRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Q6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10238 for 271 contacts (37.8/contact) +
2D Compatibility (PS) -5480 + (NN) 3896 + (LL) 2452
1D Compatibility (HY) -4800 + (ID) 950
Total energy: 5356.0 ( 19.76 by residue)
QMean score : 0.255
(partial model without unconserved sides chains):
PDB file :
Tito_4Q6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q6M-query.scw
PDB file :
Tito_Scwrl_4Q6M.pdb
: