Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VEIKQIKAKDTQDIRHRVLRPEQPEENAIYPNDDMEGTFHLGAFEKDVLLGVASFYPEKSTVIMNPAQYRIRGVATERRMRLKGLGTALLAEGEAEIWTRGADIIWCNARIVAVGFYEKHGYRKVGKSFVIPGIGEHYLMKKVNPNKKVDQDN
2JDC Chain:A ((2-143))
IEVKPINAEDTYELRHRILRPNQPIEACMFESDLLRGAFHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKLGFSEQGEVFDTPPVGPHILMYK-----------
General information:
TITO was launched using:
RESULT:
Template:
2JDC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40457 for 1081 contacts (-37.4/contact) +
2D Compatibility (PS) -14989 + (NN) -3721 + (LL) 100
1D Compatibility (HY) -9200 + (ID) 2850
Total energy: -71117.0 ( -65.79 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2JDC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JDC-query.scw
PDB file :
Tito_Scwrl_2JDC.pdb
: