Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLYIIANPHAGNKNASTIVG----KIQELYHTEDISVFYTEQKDDEKKQVINILRSFKES--DHLMIIGGDGTLSKVMTYLPQHI---PCAYYPVGSGNDFARALKIPNLKETLTAIQTERLKEINCFIYDKGLILNSLDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAIKSLLHSSKVQVLVEGETGQQIKLNDLYFFALANNTYFGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLI--EIDGEIVELDQISLKCQKRYLYM |
| 4WER Chain:A ((9-293)) | ----LIVNPSSGGEKAKEFETLAEEKLKQLF--DEVVVKQTEKGGDAEQ----FAREAAESHFDSVFVMGGDGTVNEGISGLAEQAYRPKFGFFPLGTVNDLARALNLPMDPE--EAIQQLDLEKTSAL--DVGKINDDYFMNVVAIGTI--------------KLGKLAYFISGAKHLANAQTYPFHLSLDQKEQTIESSTVLVGLTNS--IGGFETLLPEAQVDDGKLHLVYLKDQSLWDAVKAVPDLLKGVDQSTDNLVYLTFKEGTISLENQEELTTNVDGDEGAALPITLKILPKHLTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37303 for 1993 contacts (-18.7/contact) +
2D Compatibility (PS) -26048 + (NN) 9881 + (LL) 2544
1D Compatibility (HY) 8000 + (ID) 1400
Total energy: -44326.0 ( -22.24 by residue)
QMean score : 0.209
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