Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNLIRLAEIFDVSLDEHVLAKTNEVKVERIYENKPLDLRKYNKIYWFIFRNIIRSLLIILAILTFL
2GB3 Chain:A ((44-58))
---------------------KTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVK
General information:
TITO was launched using:
RESULT:
Template:
2GB3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3335 for 53 contacts (62.9/contact) +
2D Compatibility (PS) -1693 + (NN) -1792 + (LL) 2140
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -210.0 ( -3.96 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2GB3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GB3-query.scw
PDB file :
Tito_Scwrl_2GB3.pdb
: