Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKYLKVSRIIKRRPVAKEVADKGRVKVNGVLAKSSTDLKLNDQVEIRFGN--KLLTVKVLEMKDSTKKEDAIKMYEIINETRIETDEQA
3BBU Chain:A ((9-91))
VRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAAL-LYEETAESVEKREKMA
General information:
TITO was launched using:
RESULT:
Template:
3BBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17666 for 572 contacts (-30.9/contact) +
2D Compatibility (PS) -8183 + (NN) 3077 + (LL) 64
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -28508.0 ( -49.84 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3BBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBU-query.scw
PDB file :
Tito_Scwrl_3BBU.pdb
: