Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVSQTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHA--SKSKFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLFKLSYASYITSLADVAISDNVADAQLFI-FLKKTLELIEDGLDYEILTNIFEVQLLERFGVALNFHDCVFCHRVGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQFDDLQTISVKPEMKLKIRQFLDMIYDEYVGIHLKSKKFIDDLSSWGSIMKSD |
3Q8D Chain:A ((9-164)) | ---------VLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFT--PLLLRFGGRGEVKTLRSAEAVSLALPLSGI-TLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGS---GEPVDDTMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFM----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3Q8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -47087 for 999 contacts (-47.1/contact) +
2D Compatibility (PS) -16092 + (NN) -1077 + (LL) 2028
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -71028.0 ( -71.10 by residue)
QMean score : 0.372
|
|
|