Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNQLIYTGKAKDIYSTKDENVIRTVYKDQATMLNGARKETIDGKGALNNQISSLIFEKLNMAGVVTHYIEQISKNEQLNKKVDIIPLEVVLRNVTAGSFSKRFGVEEGRVLETPIVEFYYKNDDLNDPFINDEHMKFLGIVNDEEIAYLKGETRRINELLKDWFAQIGLNLIDFKLEFGFDKDGKIILADEFSPDNCRLWDAEGNHMDKDVFRRDLGSLTDVYQVVLEKLIAL
4FE2 Chain:A ((23-254))
--KQLIYSGKAKDIYTTEDENLIISTYKDQATAFNGVKKEQIAGKGVLNNQISSFIFEKLNVAGVATHFVEKLSDTEQLNKKVKIIPLEVVLRNYTAGSFSKRFGVDEGIALETPIVEFYYKNDDLDDPFINDEHVKFLQIAGDQQIAYLKEETRRINELLKVWFAEIGLKLIDFKLEFGFDKDGKIILADEFSPDNCRLWDADGNHMDKDVFRRGLGELTDVYEIVWEKLQEL
General information:
TITO was launched using:
RESULT:
Template:
4FE2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68182 for 1802 contacts (-37.8/contact) +
2D Compatibility (PS) -24889 + (NN) -6894 + (LL) 128
1D Compatibility (HY) -30000 + (ID) 9200
Total energy: -139037.0 ( -77.16 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_4FE2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FE2-query.scw
PDB file :
Tito_Scwrl_4FE2.pdb
: