Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTNKLKMRETMIAYAFLAPILLFFLIFVFAPMVMGFVTSFFNYSMTQFTFIGLANYNRMFHDSIFMKSLINTVIIVIGSV----PVVVFFSLFVAANTYEKNVFSRSFYRCV---FFLP-----VVTGSVAVTVVWKWIYDPMSGILNYILKSGHVIEQNISWLGDKHWALLAIIIILLTTSVGQPIILYIAAMGNIDNSLCEAARVDGANEMQVFWQIKWPSLLPTTLYIAVITTINSFQC-FALIQLLTSGGPNYSTSTLMYYLYEKAFKLSEYGYANTMGVFLAVMIALISFAQFKILGNDVEY |
| 4TQU Chain:M ((7-284)) | ------DIKRDWLLYAMLLPTIIWFLIFLYKPMI-GLQMAF--------PWIGFDHFVTLFQSEQFIRAIKNTLTLSGLSLLFGFPMPILLALMI------NEVYSKGYRKAVQTIVYLPHFISIVIVAGLVVTFL-----SPSTGVVNNMLS--WIGLDRVYFLTQPEWFRPIYISSNIWKEAGFDSIVYLAAIMSINPALYESAQVDGATRWQMITRITLPCIVPTIAVLLVIRLGHILEVGFEYIILLYQPTTYETADVISTYIYRLGLQGARYDIATAAGIFNAVVALVIVLFANHMSRRITK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190946 for 1668 contacts (-114.5/contact) +
2D Compatibility (PS) -26185 + (NN) -9169 + (LL) 2256
1D Compatibility (HY) -29200 + (ID) 3450
Total energy: -256694.0 ( -153.89 by residue)
QMean score : 0.106
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